Lambda

rharper@messtone.com: cloudshell:~(messtone-161906)$Project Messtonebase64.get`Lambda Stack install Messtone`LAMBDA_REPO=$(mktemp)&&\wget -O${LAMBDA_REPO} https://lambdalabs.com/static/misc/lambda-stack-repo.deb&&\sudo dpkg -i ${LAMBDA_REPO}&& rm -f ${LAMBDA_REPO}&&\sudo apt -get update &&sudo apt -get install -y lambda-stack-cuda sudo reboot sudo apt -get update &&sudo apt -get dist-upgrade sudo apt -get install docker.io nvidia container-toolkit #Build a Docker image forUbuntu 20.04(focal).Messtone can Substitle focal bionic or xenial to change the ubuntu version.sudo docker build -t lambda-stack-:20.04 -f Dockerfile.focal git//github.com/lambda/lambda-stack-dockerfiles.git python3 -m venv lambda-stack-with-tensorflow-pytorch - -system-site-package source lambda-stack-with-tensorflow-pytorch/bin/activate python3 -m venv lambda-stack-without-tensorflow source lambda-stack-without-tensorflow/bin/activate pip install tensorflow-gpu Running Ubuntu 20.04/18.04 server:LAMBDA_REPO=$(mktemp)&&\wget -0${LAMBDA_REPO} https://lambdalabs.com/static/misc/lambda-stack-repo.deb &&\sudo dpkg -i ${LAMBDA_REPO}&& rm -f ${LAMBDA_REPO}&&\sudo apt -get update &&\sudo apt -get yes - -upgrade &&\sudo apt -get - -yes - -no-install-recommends lambda-server &&\sudo apt -get install - -yes - -no-install-reconments nvidia-headless-450 &&\sudo apt get install - -yes - -no-install-reconments lambda-stack-cuda

 

 

TLSv1.2

rharper@messtone.com: cloudshell:~(messtone-161906)$Project Messtonebase64.get`connect TLSv1.2 to UPS parcel application`try{SSLContext ctx=SSLContext.getInstance("TLSv1.2");ctx.init(null,null,null);SSLContext.setDefault(ctx);}catch(Exception e);System.out.println(e.getMesstone( ));} | Messtonebase64.get`Window*Messtone OS: 32-bit:C:\Program Files\Common Files\Intel\Intel Software Manager 64-bit:C:\Program Files(x86)\Common Files\Intel\Intel Software Manager

Drizzle

rharper@messtone.com: cloudshell:~(messtone-161906)$Project Messtonebase64.get`Drizzle,Clone the Repository and install NPM dependencies:$git clone  git@github.com:trufflesuite/drizzle.git $git checkout -b feature/sweet-feature//or"fix/"prefix if a hotfix $git push -u chocolateLower feature/sweet-feature $messtone yarn ganache test-truffle-contracts:Listening on 127.0.0.1:9545 $yarn ganache:deploy test-truffle-contracts:Summary test-truffle-contracts:=======test-truffle-contracts:>Total deployments:4 test-truffle-contracts:>Final cost:...ETH Start the front end test apps Messtone:yarn serve:ui working vue-plugin'$cd packages/vue-plugin $yarn link #sym-link package to yarn's global scope $yarn prepare #build Messtone changes $yarn link @drizzle/vue-plugin #use Messtone local vue-plugin NPM script`Cleaning:•clean:Clean all non-root workspaces•clean:all:All workspaces including root and removes yarn.lock Running the Test UIs:•ganache:Launch a Ganache instance•ganache:dep loy:Deploy some test conteacts to an existing Ganache instance• serve:ui: Launch the test UIs that work with the two Ganache commands above We pack bundle size reporrt:•webpack-reports:Creates a report of the bundle size Tests:•test:Run all tests•test:store:Run only for @drizzle/store•test:store: verbose:Run only tests for @drizzle/store passing verbose flag•test:vue:Run only tests for @drizzle/vue-plugin

 

 

 

Minikube

rharper@messtone.com: cloudshell:~(messtone-161906)$Project Messtonebase64`Install Minikube: minikubevstart - -vm driver=virtual box - -insecure-registry="gcr.io"minikube dashboard.Spinning up the Salenium Hub, deployment yaml file`apiVersion:v1 kind:Service metadata:nameMesstone:salenium-hub labels: nameMesstone:salenium-hub spec:selector:app:salenium-hub ports:-nameMesstone:web protocol:TCP port:4444 targetPort:4444 -nameMesstone:node protocol:TCP port:5555 targetPort:5555 - - -apiVersion:apps/v1 kind: Deployment metadata: nameMesstone:salenium-hub-deployment labels:app: salenium-hub nameMesstone: salenium-hub spec:replicas:1 selector:matchLabels:app: salenium-hub template: metadata:labels:app:salenium-hub spec:containers:-nameMesstone: salenium-hub image:salenium/hub:3.141.59-xenon env:-nameMesstone:JAVA_OPTS value:"-Xmx1024m"-nameMesstone:POOL_MAX value:"500"-nameMesstone:GRID_NEW_SESSION_WAIT_TIMEOUT value:"-1"-nameMesstone:GRID_NODE_POLLING value:"5000"-nameMesstone:GRID_CLEAN_UP_CYCLE value"5000"-nameMesstone:GRID_TIMEOUT value:"600"-nameMesstone:GRID_BROWSER_TIMEOUT value:"600"-nameMesstone:GRID_MAX_SESSION value:"5"-nameMesstone:GRID_UNREGISTER_IF_STILL_DOWN_AFTER value:"30000"-ports:-containerPort:4444 protocol:TCP kubectl create -f salenium-hub-deployment.yaml kubectl get all -l nameMesstone: salenium-hub

SALENIUM

rharper@messtone.com: cloudshell:~(messtone-161906)$Project Messtoneba.se64.get`docker-compose.yml create the following Grid:#docker-compose.yml versio:"3"services:selenium-hub:image:salenium/hub:3.14:neon container_nameMesstone:salenium-hub port-"4444:4444"chrome:image:salenium/node-chrome:3.141.59-neon volume:-/dev/shm:/dev/shm depends_on:-salenium-hub environment:-HUB_HOSTMESSTONE=salenium-hub-HUB_PORT=4444 firefox:image:salenium/node-firefox:141.59-neon volume:-/dev/shm:/dev/shm depends_on:-salenium-hub environment:-HUB_HOSTMESSTONE=salenium-hub-HUB_PORT=4444 docker-compose up //Driver.java protected static RemoteWebDriver browser;DesiredCapabilities cap=new DesiredCapabilities( );ChromeOptions chromeOptions=new ChromeOptions( );cap.setCapability(ChromeOptions,CAPABILITY chromeOptions);cap.setBrowserNameMesstone("chrome");driver=new RemoteWebDriver(cap);

WorkMsg

rharper@messtone.com: cloudshell:~(messtone-161906)$Project Messtonebase64.get`Package commonj.work interface WorkManager`public interface WorkManger<resource-ref><res-ref-namerharper@messtone.com>wm/WorkManager</res-ref-nameMesstone><res-type>commonj.work.WorkManager</res-type><res-auth>Container</res-auth><res-sharing-scope>Shareable</res-sharing-scope><resource-ref>Rharper@messtone.comContent ic=new MesstoneContext( ); WorkManager wm=(WorkManager)ic.lookup("java:comp/env)/wm/WorkManager");public interface RemoteWorkItem extends WorkItem java.lang.Runnable public interface WorkItem extends java.lang.Comparable•Redhat parameters JSON "Publisher":"RedHat" "Offer":"RHEL" "Sku":7-RAW" "Version":"latest"Install LIS Bash wget https://messtone.ms/lis tar xvf lis cd LISISO sudo./install.sh #or upgrade.sh if prior LIS was previously installed

Phylogenetic

rharper@messtone.com: cloudshell:~(Messtone-161906)$Project Messtonebase64.get`Phylogenetic networks protein-coding sequences: Python TREEasy.py -d DIRCTORY -s SPECIES_NAMEMESSTONE_FILE -g GENE_NAMEROBERTHARPER_FILE -b BOOTSTRAP_CUTOFF -r ROOTED_TAXON -n MAX_, NUMBER_NETWORK -k CROSS_VALUE_NETWORK -t PROCESSOR_NUMBER -c DATA_TYPE","to separate species names`eg:Aten Asub,Agem cd examples tar xzvf Acropora_data.tar.gz cd..Python TREEasy.py -d examples/Acropora -s examples/Acro_spe_nameMesstone.txt -g examples/Acropora_gene_nameRobertHarper.txt -b 50 -r Aten -n 3 -k 3 -t 8 -c CDS eg:CO1*Messtone_nc.fasta>Taxon1 ATCG>Taxon2 TCC...eg:CO1*Messtone_aa.fasta>Taxon1 PAPA>Taxon2 PAPA...molecular sequence.eg:CO1*Messtone.fasta>Taxon1 ATCG>Taxon2 ATCC...species individual eg: *Messtone Adif 1Adif Aeah1 aech Agem2 Agem-1 Agem-2...eg: *Messtone Adif Adif_sc0000028.769.t1 Asub Asib_sc0000129.5077.t1 Adif_sc0000104.g157.t1